YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45387761, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSYQRGRVT LQQYKLLLCS LYKIYEALEE VLDSNASHDA VAPIYFPQEL SRLPALRSDL  60
   61 QHFYGRGWRE QMQVPDAALA YAQRLQQVGR EHPEYLVAHV YTRYLGDLSG GQVLGRITQR 120
  121 SLGLQDGEGL SFFSFPNISS PKLFKQLYRS RMNSITLTEE QRRAVLEEAN TAFQLNIQVF 180
  181 DELQECVSCV SETEPAVRQR HSPQTQSTAA DVGVCEPLQG SSSLMPRLLR TLLGVCVLLA 240
  241 VGMVYAF

Type	Start	End	Confidence
Cytoplasmic	1	227	0.77
Transmembrane Helix	228	246	0.89
Non-Cytoplasmic	247	247	0.85