YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBSP1_DANRE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGAVATGGA QSAGLGAAAA GCCSSASGAG SAALLSGGSG IAGRLPSRVL EHIFSYLELM  60
   61 DLLNCSLVCW HWNNCLSDEN SEVWRSLCAR SLSDEAMRSD ILCNLASYKG KLKSFQHALS 120
  121 SHDCSRNVYI KKNGFTLHRN PIAQSTDGAR GKIGFSEGRH AWEIWWEGPL GTVAVIGIAT 180
  181 KRAPMQCQGY VALLGSDDQS WGWNLVDNNL LHNGEVNGNF PQCNNAPKYQ IGERIRVILD 240
  241 MDDKTLAFER GFEFLGVAFR GLPKTCLFPA VSAVYGNTEV TMVYLGRPLD G

Type	Start	End	Confidence
Signal Peptide	1	28	0.97
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	291	0.98