YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|41055949, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWECGCFLVL WSELSVVWHP WNVKIRKRRL IDNKMKVAQL LILSCLVWEG KTKVQFPEQE  60
   61 KRPDYWRDFA QRSLKDALKL QELNKNIAKN IILFLGDGMG VPTVTAARIL KGQLSGQNGE 120
  121 ETQLEMDKFP HVALSKTYNT NAQVPDSAGT ATAFLCGVKA NEGTVGVSAA AVRSQCNTTQ 180
  181 GNEVTSILKW AKDAGKSVGI VTTTRVNHAT PSAAYAHCVD RDWYSDADMP NEALQSGCKD 240
  241 IARQLFENIP DINVIMGGGR RSMYPKNTPD VEYPGDKKQN GTRKDGRNLV GEWIDRVKEK 300
  301 RGYYVWNKKD LLSLNPNNVD YLLGLFEPAD LNYELERNTE NDPSLTEMVD VAIKILKKNE 360
  361 RGFFLLVEGG RIDHGHHGSS SSRRPGAALH PSRHGLRRLH RPEQRPLPDK LGLFFILQSH 420
  421 FSSTALSSLG QMAALLTLLL LLRCLQIKNF P

Type	Start	End	Confidence
Non-Cytoplasmic	1	423	0.96
Transmembrane Helix	424	445	0.85
Cytoplasmic	446	451	0.86