YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ADA2A_DANRE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MICGANATNG TNATKEYTLL VALPLSIAVG LLILLIIFGN VLVIIAVFTS RALRAPQNLF  60
   61 LVSLASADIL VATLVMPFSL ANELMGMWTF GGVWCEIYLA LDVLFCTASI THLCAISLDR 120
  121 YWSITQAIEY NLKRTPQRIK RIIFIVWIIA AVISCPPLIT MKKSEGDICD INKEKWYIVS 180
  181 SCIGSFFLPC IIMVLVYIRI YQIAKKRTRA PPGDHRKNEV GKKENDPHEK LNGIQNAEPD 240
  241 DKDEINGVDM EESSSSDHKV SNPCSLKKKS SKGKTKLSQI KPGDGDKTEA CQTTKASRWK 300
  301 GRQNREKRFT FVLAVVIGVF VICWFPFFFT YTFTAFCDCC VPETLFKFFF WFGYCNSSLN 360
  361 PIIYTIFNND FRRSFKKILC RRDKRRVV

Type	Start	End	Confidence
Non-Cytoplasmic	1	26	0.87
Transmembrane Helix	27	48	0.93
Cytoplasmic	49	58	0.85
Transmembrane Helix	59	81	0.91
Non-Cytoplasmic	82	96	0.88
Transmembrane Helix	97	118	0.89
Cytoplasmic	119	141	0.88
Transmembrane Helix	142	160	0.97
Non-Cytoplasmic	161	176	0.92
Transmembrane Helix	177	200	0.92
Cytoplasmic	201	308	0.99
Transmembrane Helix	309	329	0.96
Non-Cytoplasmic	330	347	0.89
Transmembrane Helix	348	368	0.91
Cytoplasmic	369	388	0.93