YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29468311, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDAAAPADN NGEPGLNGSW VELEMNRNAA SLSSSSASVP PPLAQVVEED DGMVGGLEHV  60
   61 PSCSSIHNGD MEKILLDAQH ESSRSNSSCD SPPRPHSPQD EGQIIFDVDM RRDSQEEVME 120
  121 KIRDDDILMK DSDRMADWSS RPENIPPKEF HFRHPRRSVT LSMRKTGAMK KGGIFSAEFL 180
  181 KVFIPSLLLS HILVLGLGVY IGKRLTTPPA SSI

Type	Start	End	Confidence
Cytoplasmic	1	178	0.75
Transmembrane Helix	179	201	0.82
Non-Cytoplasmic	202	213	0.79