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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6180207, gi|1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSFKTFTS SGSMSGGMGG GGIRKNFSSM STSAVPMGSR SSVSFRRSGG GGGGGGFGAG  60
   61 SGGSFSYSMG GGGGGGGSGY GGGFGSGGGF GSGGGFGGGA GFGGGSAYGG GAGFGGGFGP 120
  121 GGVVPITAVT VNQNLLAPLN LEIDPNIQVV RTQEKEQIKT LNNRFASFID KVRFLEQQNK 180
  181 VLETKWSLLQ EQTTTRSNID AMFEAYIANL RRQLDGLGNE KMKLEGELKN MQNLVEDFKN 240
  241 KYEDEINKRA AVENEFVLLK KDVDAAYMNK VELEAKVDSL QDEINFLRAI FEEELRELQS 300
  301 QIKDTSVVVE MDNSRNLDMD AIVAEVRAQY EDIANRSRAE AESWYKQKFE EMQSSAGKYG 360
  361 DDLRNTKAEI ADLNRMISRL QNEIEAVKGQ RANLEAQIAE AEERGELAVK DAKLRIRDLE 420
  421 DALQRAKQDM ARQVREYQEL MNVKLALDIE IATYRKLLEG EESRIASGGN TATIHIQESS 480
  481 SSSGGGGGGG FGYGGGSGYG GGSGYGGGSG YGGGSGFGYG GGSGMSIGGG SGMSMSGGGG 540
  541 GQISMSRSSI VSSQKRRF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle