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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6708054, gi|1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDGLTGLCI GIILLLNGGL VVMRRQDSSS ALGSIFRTRC AARCLSLHST RIALSPRHFQ  60
   61 SNGSLGWCQS HKQCAKCLEP CKDSWELKDG PCRDLCEHAF PKRHGECVTS CEFLRSVMVV 120
  121 KQGDCPPPER ASGFAAACVE GCEEDGECSG QKKCCPNGCG HTCQSPKNLY RGAPLKPRKE 180
  181 LVFEELESGV LEVRWSSKFN VSAEPVLNVL QRRWNYGIHP SEDGATEWQV VARTSGERVW 240
  241 LTDIRPGRWY QFRVAAVNVH GTRGYTTPSR HFRSSKDPPP PPAPSDLHVS DMTFGADHSA 300
  301 SVRLSWSISA DLDIPVNHYK LSWSSSDHNL PPKLKKRETV NGDSTYAELD DLRENGSYTV 360
  361 ELQAVSYWGQ VPLKSSKAIL QFTTSQTQSD LEPTVSPVFI KPQSDLLDVG TPFYQDGQLQ 420
  421 VRVYWKKKDP TVNRYRVQWA PEFCSHNGSR TQGKLITQEN FASLPGLQFS CKYKVIIQPV 480
  481 GLKGRTQVES TTFYTPSCAT IQSKSPKPIP CSSVPVVQPK VLVKAENLTA AFSVYLGNVT 540
  541 GLFSWVVAMP QQPQQVTGYQ VTWAEVITES RRNNLPNSLI SQSQILPPER NILVVSGLQL 600
  601 ASLYRLEVQV ITAAGQGPAT SRTFQTPTHS KPVLHYKPRI KKHHLRSVIE RH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle