YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|40254671, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRLLLNFFW VAAFSALLAA PGLRASPVVG QEPIRCAPCS PERLAECPAV DAGCEEVLRE  60
   61 PGCGCCLACA LKRGDPCGIY TAPCGSGLRC LPKPGEARPL HALTRGQAVC TESPEPNHSQ 120
  121 SETAPDHPES HNGATAVNEG SSTVFVTGHG KPFDPRIITN KESMKAKVNA IRKKLVEQGP 180
  181 CHIELQTALD KITKSQQKLG DKLTRFYLPN CDKHGLYKIK QCESSLDGQR GKCWCVSSWN 240
  241 GKKIPGSSDL PADAECPEEL NH

Type	Start	End	Confidence
Signal Peptide	1	25	0.98
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	262	0.99