YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|63102117, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.34
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDISTVFKI SVIAFTLFYG SCGSGCPVLE CWFVQEKPGH GGGLSTPMSQ EKSLIFIRTE  60
   61 AYSEEIKTEL HPPADISSSR VYYVTDPAGT FCSAALNPPK GSVNKPKCEI NPFMPHASMV 120
  121 RWASALTDSA QSPVYLQADW FSVAAQGLDD QLTLSNIMRA PSASKEPKVI LSVSSKTPVV 180
  181 RCRLGEPVLL DCGFWIDPSS PLHGSGFSIE WRYQFRGEGR LVLAYDGKND RFAETSESGA 240
  241 EMDITGLYQT GNASLILEES QVRHSGTYIC TVYLPHLLAQ VAVDLEIVEP PSLSILPSPL 300
  301 PLLVPGQVLS VQCEASGFAP HTLDLGWEFT GADGKSLSLG QGSVTGHRRA SDGTFSQSSR 360
  361 LELDSTKLRL ARGGEISCVA KHDGGTRRAS AALNVIGVAA PSIEDSMAMV AVALLLYGMI 420
  421 KFLSWTFSSS DSGDSELNDK KEK

Type	Start	End	Confidence
Signal Peptide	1	23	0.46
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	443	0.87