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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42734371, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.69
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYRLTRVSF LFLYLFANVF TGIQSKEHVL LDMKAAGSEL GWLTWPKEEG WEVVQTVVNG  60
   61 SLLYTYSVCN VASDTEQDNW LRTTFIQRRP DVSRMSVELS FIVRDCSTFG GSSPSCRETF 120
  121 GLFLGETDSD VGTNFRKSQF RKVATVAPDE VTADRGRGRA DLRVNVEKRS IGTLSRRGFY 180
  181 LAFQDLGGCV ALLGLRVFYT TCPATMRSLA AFPEQVALGA EVEGTCVKDA VVLGEAAPRM 240
  241 YCTAEGDWVV PVGQCVCRAG YQAVGDSCKA CEPGFYKSTD SSQPCEVCPE NTQRSGRGAL 300
  301 LCPCMEGFYR APTDPISAPC SSLPSPPRDL VYTPLLTAGS LQLLWRPPAD TGGRSDVTYS 360
  361 VACERCEGGL CTLCGGRVRF EPAQTALRAP EVVVSELEPH VNYTFTVEAQ NGVSQFSRKR 420
  421 AKASITTVLH FTDGPRVLYL RVEDRTTSSL TLSWAVDHHV QNQPSPRYEL MYRKKEDPGE 480
  481 LDVTTYTVLV LEKNSVPIND LLPGTKYVFR VHTLTAEGHP SSHSAELEFE TLPLAESRTQ 540
  541 NSSMVVMGAI AGGGVMLLIV VVILLLHKRR LNSHVRRRVD GDYFSCPEKL LPLKTYIDPH 600
  601 TYEDPCAAIL KFASEIHPGH ITKQKVIGAG EFGEVFRGSL KMPGRSEVAV AIKTLKPGYT 660
  661 EKQRQDFLSE ASIMGQFSHK NIIRLEGVVT KFKDAMIITE YMENGALDQY LRDHDGDFSS 720
  721 YQLVGMLNGI AAGMKYLSDM NYVHRDLAAR NVLVNSNLEC KVSDFGLSRV LEDFPEGTYT 780
  781 TTGGKIPIRW TAPEAIAYRK FTSASDVWSF GIVMWEVMSF GERPYWDMSN QEVMKSINDG 840
  841 YRLPAPMGCP SAVNQLMLQC WMQDRSTRPR FVDIVNLLEK LLRNPESLTS IASIDPRVSI 900
  901 RLPSTSGCDG APFRSVDEWL ESIKMAQYRE TFALAGIKSI DQVLRLKIED IGNIGVRLAG 960
  961 HQKRIAYSIL GLQDPVGALD LFAM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle