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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33520712, gi|...
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPCVLLNLCE YDTQKLVKIK SVKLGSLKWT LNGVILMFIC IMMLWNKEYQ EYDFVVSSVT  60
   61 TKVKGVAKIT LPEVGDVVWD VVDYSGPSQG KNSFFVATNA IVTKNQKQGN CAEILPNGKL 120
  121 CRTDKDCEKG FSDQHSHGVQ TGACVKLEIL KKTCEVTAWC PIENKKNPRP ALLAAAENFT 180
  181 VMIKNNIRFP AFNYIRRNIL SEMKDTDFKG CIYHRYKNPY CPIFRLGDIV AEAKEKFSEM 240
  241 AVEGGVIGIQ INWDCDLNRF FHSCLPKYSN RRLDEKESNR TLYPGLNFRF ARYSTVNGVE 300
  301 QRTLFKMYGI RFDVMVFGKA GKFSIIQLII YIGSTLSYYA ITTIFLDWLI GTGYYSKEAK 360
  361 QNYTERKFEA VQDREECFLC VSFVDEDNLR VVKKSRKKIL QETKPLSIHQ RKNELASMKT 420
  421 LLSVLQCGQS RSEPVQNGQS GGLIVDENLS SRHNGRQNPD TPLLETTQSS SPTWCQCGSC 480
  481 RPAETLQEQL CCRLKKGRCI TSSPIFSSLI VSRSVLENAL FFVDPLAELH EESQLRHGAY 540
  541 AQFIRWRFGD STPRDALPVI PSCCIWRIRA EYPSPDGTYR GLRSFQVITS QTEVNR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle