YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21388555, gi\|...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSVLALTSV VLLGIASQST ALVVNTDSEK HALVGSDVRL SCSFFSWQWT SPEVSFTWHY  60
   61 RPDGAKDAIS IFHYGGGEAY PANKGPFQNR LEFVGNPSRR DGSILIKNLD FGDNGTFTCD 120
  121 AKNPPDIGGH PSTIRLLVFE KVPVQAGVIT GSIIGVVLGL LILVVAIYYL MRFLVARRVF 180
  181 SLSMSKHGKK GKGKEGSQQK QRI

Type	Start	End	Confidence
Signal Peptide	1	21	0.97
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	145	0.99
Transmembrane Helix	146	170	0.89
Cytoplasmic	171	203	0.95