YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33286931, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKLFESIGK LGLALAIGGG VVNSALYNVD AGHRAVIFDR FRGVQDVVVG EGTHFLIPWV  60
   61 QKPIIFDCRS RPRNVPVITG SKDLQNVNIT LRILFRPVAG QLPRIFTSIG EDYDERVLPS 120
  121 ITTEVLKSVV ARFDAGELIT QRELVSRQVS EDLTERASTF GLILDDVSLT HLTFGKEFTE 180
  181 AVEMKQVAQQ EAERARFVVE KAEQQKQAAI ISAEGDSQAA LLIANSLAEA GDGLVELRKL 240
  241 EAAEDIAFQL SRARNVTYLP SGQGTLLQLP Q

Type	Start	End	Confidence
Signal Peptide	1	24	0.94
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	271	0.99