YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	S22BB_DANRE
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLLTMIARL ADGLPLAASM QEDEQMGRDL QQYQSQAKQL FRKLNEQSPN RCTLEAGSMS  60
   61 FHYVIEKGVC YLVLCEAGFP KKLAFAYLED LQAEFHEQHG KKVPTVSRPY SFIEFDTYIQ 120
  121 KTKKSYIDSR ARRNLSNINT ELQDVQRIMV ANIEEVLQRG EALSALDSKA SNLSSLSKKY 180
  181 RSDAKYLNTR STYAKLAAGG VFFIMLIVYI RFWWL

Type	Start	End	Confidence
Cytoplasmic	1	190	0.86
Transmembrane Helix	191	213	0.89
Non-Cytoplasmic	214	215	0.78