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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|41054922, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLQISGILL VAAAAYATIE APEEFVSLAE MEDTLLRNLF RGYQKWVRPV LHANDTITVR  60
   61 FGLKISQLVD VDEKNQLMTT NVWLWEEWTD YKLRWNPEDY GGITSIRVPS ETIWLPDIVL 120
  121 YENADGRFEG SLMTKAIVRF NGTIMWTPPA SYKSACTMDV TFFPFDRQNC SMKFGSWTYD 180
  181 GTMVDLTLVD AYVDRKDFFD NGEWEILNAT GQRGSRRDGI YSYPYLTYSF ILKRLPLFYT 240
  241 LFLIIPCLGL SFLTVLVFYL PSDEGEKLSL STSVLVSLTV FLLVIEEIIP SSSKVIPLIG 300
  301 EYLLFIMIFV TFSIIVTVFV INVHHRSSAT YHPMAPWVKS LFLQRLPRLL CMRGHTDRYQ 360
  361 YPDIELRSPE LKRGMKKGQQ KSAGGGRAGV KEDENQAWIA LLEKATHSVH YISRHIRKEH 420
  421 FIREVVQDWK FVAQVLDRIF LWAFLTVSVL GTILIFTPAL QMFFSTS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle