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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39653367, gi|...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALTILPILG PISVSESLVA IITICLVYLL MRLNRTKIPD GLQKLPGPKP LPIIGNVLEI  60
   61 GNNPHLSLTA MSKCYGPVFQ IQIGMRPVVV LSGNDVIRQA LLKQGEEFSG RPELYSTKFI 120
  121 SDGKSLAFST DQVGVWRARR KLALNALRTF STVQGKSPKY SCALEEHISN EGLYLVQRLH 180
  181 SVMKADGSFD PFRHIVVSVA NVICGICFGR RHSHDDDELV RLVNMSDEFG KIVGSGNPAD 240
  241 FIPFLRILPS TTMKKFLDIN ERFSKFMKRL VMEHYDTFDK DNIRDITDSL INHCEDRKLD 300
  301 ENSNLQVSDE KIVGIVNDLF GAGFDTISTA LSWAVVYLVH YPEVQERLQR ELDEKIGKDR 360
  361 TPLLSDRANL PLLESFILEI FRHSSFLPFT IPHCTSKDTS LNGYFIPKDT CVFVNQWQVN 420
  421 HDPELWKDPS SFIPDRFLTA DGTELNKLEG EKVLVFGLGK RRCIGESIGR AEVFLFLAIL 480
  481 LQRLKFTGMP GEMLDMTPEY GLTMKHKRCL LRVTPQPGF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle