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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21667664, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQTWGNFFF SLLDYKTEKF VIAKNKKVGV LFRLFQLTGI GYLIGWVFIW KKGYQETEEA  60
   61 IQSSVITKLK GVDLTNSSQF GLQLWGAEDY VIPPQGDRVF FVVTNYLVTP NQRLGHCPES 120
  121 PKVPDGFCTN DNECVEGESV LAGLGVKTGR CLNDTGTCEI NAWCPVEHGH APVEPMLAKA 180
  181 ENFTVYVKNF IKFPKFGFFK SNVLPITNST YLKTCRYDKD HHPYCPIFLV GDVINWTGYT 240
  241 FQDLATRGGS IGIGIEWNCD LDKDESHCNP EYSFTRLDSS ENYTALGPSG YNFRFARYYN 300
  301 DAAGQTYRNL FKVYGIRFDI LVNGKAGRFS IIPTVINIGS GLALMGAGVF ACDMILLYMM 360
  361 SKSSFYRETK FEAIKKKQSE RESREQRERK HARHHRHHHH HHRQDGRHRR EEKPTAEMQP 420
  421 LTSILTQANN NPETQTQPSA ASALKPHSPE RKPQATVSFR THTTEKHTVS PVSTLRAARH 480
  481 Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle