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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|35903106, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIWSGFTRLL LLIFVCAHRS SSKQDMKPEA WLQQYGYLPP GDLRTHTARS PQSVPSAIAA  60
   61 MQRFYGLTVT GNLDANTLEA MKRPRCGVPD KFGSELKSNL RKKRYAIQGL KWDKNEITFC 120
  121 IQNYTPKVGE YETFEAIRKA FKVWESVTPL RFREISYSDI RDKVVDFADI MLFFADGFHG 180
  181 DASPFDGEGG FLAHAYFPGN GIGGDTHFDA AEPWTIGNKD LLGNDVFLVA VHELGHALGM 240
  241 EHSNDPSAIM APFYQWMETD HFVLPDDDRK GIQKLYGPGS GGHPRPPVSP ETPHHTPYPT 300
  301 PYRPGGPSYG PNICEGHFDT IGIFRGEMFV FKGKWFWRVR NNQVMENYPM PIGHFWRGLP 360
  361 TDINAAYERE DGKFVFFKGD RHWVFTESNL EPGYPKVLGE LGTGVPKDKL DAALLYTPTG 420
  421 YTYFFRGNKY YRYNEDTHSV DPDYPKPISK WQGVPDNIKA AFMSRDQGYT YFYKANKYWK 480
  481 FNNQLLKVEP GYPKSALKDW MGCPNEDSNT GGGGSDRDRE RERERERERE RERERARERE 540
  541 REQDRTNEVD KTEEEGKKEE TEVLIIEVED APSSRGGAAA VVVPLMLLVC VIFTLGALLF 600
  601 FRRYGTPRRL LYCQRSLLDK V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle