YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37620196, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFCCADLLC SCWCSLAVIA LIAAVWFFRD SRQISGIHEK HVLITGCDSG FGNLVARQLD  60
   61 RQGFLVIAVC LTETGASKLR ATASPRLKTL QLNVTDSTSI DRALEYVRRE TGGKGLWGLV 120
  121 NNAGVSVPIG PMDWMQLHDF KKVLDVNLTG VIAVTLKFLP LLKKAQGRVV NVASMLGRLS 180
  181 IIGGGYCLSK FGVEAFSDSL RRDMVHFGVK VSIIEPGFFK TQVTDLGLIE DDLKKRWSNL 240
  241 PEQVRRDYGD SYLQEYLKVQ EFSMRMLASS DLSKVSSCMR HALSARHPRT RYAAGWDAKF 300
  301 LWIPLSYLPT CVVDIFTNAL VPSPKPL

Type	Start	End	Confidence
Signal Peptide	1	23	0.49
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	327	0.90