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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27545299, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNKLREFRD GGRPMLGQWD RTLVVLLMAL ALTVTDVQAS WDQMEVLGDV KLEASMHSAV  60
   61 LSDIREAEAV VAAVSQPSGF PDSSAVVGRV FRLQVPIKAK DSGSIVKITE ASKDVLPAWL 120
  121 HWDAESGTLQ GLPLETDKGV HYISVSVSNE SKVSQSPDVF SIEVHPEEHA ETDPFQLAIQ 180
  181 QSASNDAQPF ICGNEEPVTV LTVILDADLT KMSSKQRVEL LAKMKKFSGM GLQHMKILPV 240
  241 VNNRLFDMSA FMAGPGNAKK VVENGALLSW KLGCSLDQSS IPDISSVQVP AKEGTMSAQL 300
  301 GYPVVGWHIA NKKPHVPKRV RRQLNNTPTP IPSLLPPTTY PEPPIRIVPT PTSPSIAPTS 360
  361 ESSAPPVRGP VPLPVKPTIR NRDSAPSTPT LGPPLPTRVM VTTSTIAIQP TMTRPVYVGA 420
  421 SVTPATPTTR KPTKRPPKKP KTTPIPREPK TTTTKPPRRS TPAVIGDSNI KPELRNPIDQ 480
  481 VNAYVGTYFE VKVPSDTFFD KEDGTTDKLR LTLRKGNDVV ADDSWIQFNS TSQLLYGLPD 540
  541 QEHAGKHEYF MQATDKGGLY AMDAFEVRVS MWGNSVKPPV LFTAVFDGDA RTVTNDIHKK 600
  601 ILLVKKLSQS FGDRNSSTIT LKSITKGSII VEWTNNSLQQ SPCPKDQIQQ LSKKISDPEG 660
  661 KPSSIFKFTM EPDFRPSNIT VRGTASCRNY MFVPLGEIPD PTPSPGTPAV GAGRQSTDDV 720
  721 YLHTVIPAVV VAAILLIAGI IAMICYRKKR KGKLTIEDQA TFIKKGVPII FADELDDSKP 780
  781 PPSSSMPLIL QEEKPPLPPP EYPNMATPET TPLNQDLLGE YTPLHDEDPN APPYQPPPPF 840
  841 STPMEGKGSR PKNMTPYRSP PPYVPP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle