YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TWS1B_DANRE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSSSSSVV LLLLLLSSLS IALACNKALC ASDVSKCLIQ ELCQCRPADG NCSCCKECML  60
   61 CLGSLWEECC DCVGMCNPRS MSESPATGRS TVEDLFQPIP SLFRALTEGD APTHTLVLTL 120
  121 PLAEELQYQH NLHNYLETLH NTQHNNTTSV PENSIHSSYH TQDKQCTVVY FDECVSIRQC 180
  181 KQYCESMGGS KYRWFHNACC QCIGPECVDY GSKSVRCLNC LY

Type	Start	End	Confidence
Signal Peptide	1	24	0.99
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	222	0.99