YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VANG2_DANRE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNESQYSGY SYKSSHSRSS RKHRDRRDRH RSKSRDSSSR GDKSVTIQAP GEPLLDAEST  60
   61 RGDDRDDNWG ETTTVVTGTS EHSVSNEDLT RASKELEDSS PLECRRFAGP IVSGVLGLFA 120
  121 LLTPLAFLLL PQLLWRDSLE PCGTPCEGLY VSLAFKLLVL LISSWALFLR PSRSTLPRFF 180
  181 VFRCLLMALV FLFVASYWLF YGVRVLEPRE RDYRGIVGYA VSLVDALLFI QYLALVLLEV 240
  241 RHLRPAFCLK VVRTTDGASR FYNVGHLSIQ RAAVWVLDHY YTDFPVYNPA LLNLPKSILS 300
  301 KKMSGFKVYS LGEENSTNNS TGQSRAMIAA AARRRDNSHN EYYYEEAEMD RRVRKRKARL 360
  361 VVAVEEAFTH IKRLQDDEAA ASPKHPREVM DPREAAQAIF APMARAMQKY LRTTRQQPYH 420
  421 SMESIISHLQ FCITHNMTPK AFLERYLTPG PTMQYQRENG RGRQWTLVSE EPVTAALRQG 480
  481 LVFSLRRLDF ALVVTVTPLP FLNLGEEFID PKSHKFVMRL QSETSV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle