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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TEN4_DANRE
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVKERRPYR SLTSRRDTER RYTSSSADSE DGKINPKSYS SSETLKAFDQ DSRLAYGSRV  60
   61 KDLVHHEADE FSRQGPDFSL RDMAFGDPVP PHMGAYRTEM GLPHRDYSVS VASDADTETD 120
  121 GIMSPEHAVR LWGRSNTKSG RSSCLFSRAN SNLTLTDTEH ENTENGPPLH CSSASSSPVD 180
  181 SPYPPPSHAA NQSQGRLLGN SGAQAGRDSE SEDEFGPNSF LVKTGSGNVC TPAAATANEG 240
  241 SFQNHSRLRT PPLPLFHSHS PSQHHTASIG SLSRSNYTQR SNPSPAPTDS SAPNEGPTSA 300
  301 QDSSSAQDNW LLNSNVPLET RNIAKQTFLE TLQDNFIEMD ILATARRDGA YTDGHFLFKP 360
  361 GGTSPLYCTT SPGYPLTSST VYSPPPRPLP RNTFSRPAFS LKKPYKHCNW KCAALSAILI 420
  421 SVTLVFLLAY FIAMHLFGLN WHLQPVQRQI YQLTEDNTSG LHLPTDLGLP PLGNTGLEFP 480
  481 DRGSRDDGKL DGFFPEDSFI DMGEIDVGRK VAQLIPPGIF WRSQVFIDHP MYLKFNVSLS 540
  541 KDALVGIYGR RGLPPSHTQF DFVELLDGRR LLSQGLPGLD GPPFPAQQRS LVPITSHDTG 600
  601 CIQYMDSGIW HLAVYNDGKE TEQVSFLTTA IDSIDDCPSN CFGNGDCVSG NCHCFPGFRG 660
  661 PDCSRASCPV LCSGNGQYLK GRCMCHSGWK GSECDVPTNQ CIDITCSGHG TCIVGTCICN 720
  721 PSYKGENCEE VDCLDPTCSG RGVCVRGECH CFVGWGGPGC ESPRASCMEQ CSGHGSFLAD 780
  781 TNTCNCDHNW TGHDCSTELC AADCGGHGIC VAGSCRCDEG WMGTGCEQRA CHPRCSEHGT 840
  841 CKDGKCECSP GWNGEHCTIE GCPGLCNGNG RCTLGNNGWY CVCQLGWRGA GCDTSMETAC 900
  901 SDGKDNDGDG LTDCMDPDCC LQASCHTTSL CVGSPDPLDI IQETQISSSL STLQSFYQRI 960
  961 HFLVGRDSTH VIPDVNPFDG IHACVIRGQV VTSDGTPLVG VNISFINKPA YGYTITRQDG1020
 1021 SFDLVSNGGV AIGLRFERAP FITQEHTLWL PWGRFFVMDT IVMRHEVNDI PSCDLSSFTR1080
 1081 PMPIVLPAPL TAFAGTCPER GIVVPEIQTL QEEVRIPGTD MRLGYLSSRT SGYKSLLRIT1140
 1141 LTHSTIPFSL MKVHLMVAVE GRLFRKWFSA APNLSYDFVW DKTDVYSQKV YGLSEAFVSV1200
 1201 GFEYESCPDL ILWEKRTAVL QGYETTASNL GGWSVDKHHA LNIQSGILHK GNGENIFISQ1260
 1261 QPPVIGSIMG NGRRRSISCP SCNGLADGNK LLAPVALACG SDGSLYVGDF NYVRRIFTTG1320
 1321 NVTSVLELSN SPAHKYYLAT SPVSGWLYLS DTSSRKVFKV KSLYAVKDVA KNLELVAGTG1380
 1381 DQCLPYDETR CGDGGKAVEA TLTNPRGITV DKYGVIFFVD GTMIRRIDQN GIISTLLGFN1440
 1441 DLTSARPLSC DSVMDISQVR LEWPTDLAVS PMDNSLYVLD NNVVLQISEN HQVRIVAGRP1500
 1501 MHCQVPGLDH FLVSKIAIHA TLESANALAV SHNGLLYIAE SDEKKINRVR QVSTNGEISL1560
 1561 LAGAPSGCDC KNDANCDCYS GDDGYAKDAK LNAPSSLAVS PDGELFIADL GNIRIRYVRR1620
 1621 NKAFLNPLNM YEISSPIDDE LYLFDVNASH VFTQSLTTGD YLYNFTYSGE GDLSSITDKN1680
 1681 KNRVSIRRDS TGLPLWLMGP DGQTFWFTMG TNNALKSVAA QGQEIAVMTY HGSSGLLATK1740
 1741 SNEDGWSTFY EYDNYGRLTN VTYPTGRVSS YRTDSDSTVR VQTEGSNKED ITVTTNLSAS1800
 1801 GTFYTLMQDQ VKNSYYIGLD GSLRLVLANG MEVSLHTEPH LLSGTVNPTI SKRNVTLPID1860
 1861 NGLNLVEWRQ RKEQARGQVT VYGRRLRVHN RNLLSMDFDR VTRTEKVYDD HRKFTLRIHY1920
 1921 DHAGRPTLWA PSSRLNGVNV TYSPGGHIAG IQRGTMSVRM EYDQNGRITS KIFADGKSWS1980
 1981 YTYLEKSMVL LLYSQRQYIF EFDKNDRLSS VTMPNVARQT LETTRSIGYY RNTYRPPEGN2040
 2041 ATVLQDYSED GLLLQTIHQG TGRRVIYKYG KLSRLLEILY DTTRIAFSYD ESAGMLKTVG2100
 2101 LQSEGFACTI RYRQIGPLID RQIFRFSEEG MVNARFDYNY DNSFRVTSMQ AVINETPLPI2160
 2161 DLYRYDDVSG KTEQFGKFGV IYYDINQIIT TAVMTHTKHF DAYGRVKEVQ YEIFRSLMYW2220
 2221 MMVQFDNMGR VVAKELKVGP YANTTRYAYE YDADGQLQVV SINDKPLWRY SYDLNGNLHL2280
 2281 LSPGNSARLT PLRYDIRDRI TRLGDVQYRL DEDGFLRQRG NDFFEYNSAG LLVKTYNKVN2340
 2341 GWTIKYRYDG LGRRVSSRST QGHHLQFFYA DLSSPTRVTH MYNHSSSEIT SLYYDLQGHL2400
 2401 FAMELSSGDE FYVACDNIGT PLAVFSGAGL MIKQILHTAF GEVYLDSNPS FQLVIGYQGG2460
 2461 LYEPLTKLVH MGRRDYDVLA GRWTTPDHDI RKRLNSDNIV PFNLYMFKNN NPLSNSQETK2520
 2521 CYMTDVNSWL VTFGFQLYNV IPGYRKPVTD AMEPSYELVH TQIKTQEWDS TKSVLGVQCE2580
 2581 VQRQLKSFVR LERFGQIYSA SDSGCPPTPL HTLFATGTSL FGKGVKVAIR EGRVEADIIS2640
 2641 LANEDGRRIA AVLDKASYLQ DLHFTIAGLD THYFVKSGLV EGDLSLLGMT VGQRTLETGV2700
 2701 NVTVSQVNMV LGGRSRRITD IQMQYGTLSL NVRYGSSVDE EKVRVLELAR QRAVATAWAH2760
 2761 ERHRLRQGEE GSRAWTDGER QQLLSSGRVQ GYEGFYIVSV DQFPELTDNI NNVHFWRQTE2820
 2821 MGRR

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