YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16588578, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSGHFFQGH WCDVFKCTMR CLPSTHTLSL VLCVLALTPA TLEAGPETLC GAELVDTLQF  60
   61 VCGDRGFYFS KPTGYGPSSR RSHNRGIVDE CCFQSCELRR LEMYCAPVKT GKSPRSLRAQ 120
  121 RHTDIPRTPK KPISGHSHSS CKEVHQKNSS RGNTGGRNYR M

Type	Start	End	Confidence
Signal Peptide	1	44	0.83
N-region	1	35
H-region	36	41
C-region	42	44
Cleavage Site	44	45
Non-Cytoplasmic	45	161	0.99