YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|41107662, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPDHQNESL IQRVPSAETI LGRGDARNSN TKALKITGLT VLACLLLAGQ ALTAYMVWGQ  60
   61 KQHINALTSG QEKLKAELTR KMSAGAPKAM SLPMNSMPLL KDYSDPTSDQ TAVKSKSVPL 120
  121 TKLRPIYSNQ REGSGQVDGS RLMPKMMHLP MRSMPLLVNA DEDVKSSPES VVELETKCKL 180
  181 ESEREVRPGF FKPACDEEGN YMPMQCWHST GYCWCVTKDG TEIEGTRIRG RPQCESV

Type	Start	End	Confidence
Cytoplasmic	1	35	0.85
Transmembrane Helix	36	59	0.83
Non-Cytoplasmic	60	237	0.97