YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25392172, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSLDFRRT ATMSFFAQGV QTPTLKTCVE DELDGYTEEE EAPLKRLRPG TNGLKGLQLD  60
   61 GRFVSATDGS LPTTPDPEEL DYAELERDTR QLLLDFYRTH TGMCPVDRKL HHAIPTMKRV 120
  121 VDNILVKHQI AYKGMIQRLQ LDSQPASLDF IRCIASTMFK DGVTNWGRIA SLVAFGAVVC 180
  181 SRLKELQQDQ CVERVAEQIS SYLTSEQQDW ILKNKSWHGF VEFFHQEDVE SVVRHGLLAL 240
  241 VGCAGIGAGL AFLIR

Type	Start	End	Confidence
Non-Cytoplasmic	1	231	0.78
Transmembrane Helix	232	254	0.87
Cytoplasmic	255	255	0.76