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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18858295, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRGEGREQY ELAATSEQGG KKSKSKGKKE KDKDMDELKK EVDLDDHKLS LDELTRKYNT  60
   61 DLTRGLSGTR AKEILARDGP NALTPPPTTP EWVKFCKQLF GGFSTLLWIG AILCFLAYGI 120
  121 LAASEEEPAN DNLYLGIVLS AVVMITGCFS YYQEAKSSKI MDSFKNLVPQ QALVIRDGEK 180
  181 KNINAEEVAV GDLVEVKGGD RIPADLRIIS AHGCKVDNSS LTGESEPQTR TPDFSNDNPL 240
  241 ETRNIAFFST NCVEGTARGI VINTGDRTVM GRIATLASGL EVGRTPISIE IEHFIHIITG 300
  301 VAVFLGVSFF ILSLILGYSW LEAVIFLIGI IVANVPEGLL ATVTVCLTLT AKRMAKKNCL 360
  361 VKNLEAVETL GSTSTICSDK TGTLTQNRMT VAHMWFDNQI HEADTTENQS GTSFDRSSAT 420
  421 WAALARVAGL CNRAVFLAEQ ENIPILKRDV AGDASESALL KCIELCCGSV KEMREKYNKI 480
  481 SEIPFNSTNK YQLSIHQNPN SNNTESKHLL VMKGAPERIL DRCSSILIQG KEQPLDDEMK 540
  541 DAFQNAYLEL GGLGERVLGF CHFNLPDEQF PEDFQFDTEE VNFPTENLCF IGLMSMIDPP 600
  601 RAAVPDAVGK CRSAGIKVIM VTGDHPITAK AIAKGVGIIS EGNETVEDIA ARLNIPINEV 660
  661 NPRDAKACVI HGGDLKDLSP EQLDDVLKHH TEIVFARTSP QQKLIIVEGC QRQGAIVAVT 720
  721 GDGVNDSPAL KKADIGVAMG IAGSDVSKQA ADMILLDDNF ASIVTGVEEG RLIFDNLKKS 780
  781 IAYTLTSNIP EITPFLLFII ANIPLPLGTV TILCIDLGTD MVPAISLAYE AAESDIMKRQ 840
  841 PRNPKTDKLV NERLISIAYG QIGMIQALAG FFTYFVILAE NGFLPSSLLG IRVFWDDKYV 900
  901 NDLEDSYGQQ WTYEQRKIVE FTCHTAFFTS IVIVQWADLI ICKTRRNSVF QQGMKNKILI 960
  961 FGLFEETALA AFLSYCPGMD VALRMYPLKP NWWFCAFPYS LLIFIYDEIR KLIIRRSPGG1020
 1021 WVERETYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle