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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18858309, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYGRSDSYR VATTQDKDEK GSPKKKKGAK DLDDLKKEVP LTEHKMSVEE VCRKFQTDIV  60
   61 QGLTNAKARD FLARDGPNAL TPPPTTPEWV KFCRQLFGGF SILLWIGAIL CFLAYAIQAA 120
  121 TEDDPAGDNL YLGIVLSAVV IITGCFSYFQ EAKSSKIMES FKNMVPQQAL VIREGEKMQI 180
  181 NAEEVVAGDL VEVKGGDRIP ADLRIISAHG CKVDNSSLTG ESEPQTRSPD CTHDNPLETR 240
  241 NIAFFSTNCV EGTARGVVVC TGDRTVMGRI ATLTSGLETG KTPIAKEIEH FIHIITGVAV 300
  301 FLGVSFFILA VILGYTWLEA VIFLIGIIVA NVPEGLLATV TVCLTLTAKR MARKNCLVKN 360
  361 LEAVETLGST STICSDKTGT LTQNRMTVAH MWFDNQIHEA DTTEDQSGAS FDKSSVTWVA 420
  421 LARVAALCNR AVFKAGQDSL PILKRDVAGD ASESALLKCI ELSSGSVKAM REKNKKVAEI 480
  481 PFNSTNKYQL SIHETEDNND NRYLLVMKGA PERILDRCST IMLQGKEQPM DEEMKEAFQN 540
  541 AYLELGGLGE RVLGFCHVLM PEDQYPKGFA FDTDDVNFQT DNLCFVGLMS MIDPPRAAVP 600
  601 DAVGKCRSAG IKVIMVTGDH PITAKAIAKG VGIISEGNET VEDIAARLNI PVSQVNPRDA 660
  661 KACVIHGTDL KDYSQEQIDE VLRNHTEIVF ARTSPQQKLI IVEGCQRQGA IVAVTGDGVN 720
  721 DSPALKKADI GVAMGISGSD VSKQAADMIL LDDNFASIVT GVEEGRLIFD NLKKSIAYTL 780
  781 TSNIPEITPF LLFIIVNIPL PLGTITILCI DLGTDMVPAI SLAYEAAESD IMKRQPRNPM 840
  841 RDKLVNERLI SIAYGQIGMI QALGGFFAYF VILAENGFLP SLLVGIRLNW DDRAMNDLED 900
  901 SYGQQWTYEQ RKIVEFTCHT AFFVSIVVVQ WADVIICKTR RNSVFQQGMK NKILIFGLFE 960
  961 ETALAAFLSY CPGMDVALRM YPLKPSWWFC AFPYSFLIFV YDEVRKLLLR RNPGGWVEKE1020
 1021 TYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle