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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9789573, gi|1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKGYGHESS PEAAPTGGKR KKKDKDLDEL KKEVSLDDHK LTLDELSTRY GVDLARGLTH  60
   61 KRAMEILARD GPNALTPPPT TPEWVKFCKQ LFGGFSILLW IGAILCFLAY SIQAATEDEP 120
  121 VNDNLYLGVV LSAVVIITGC FSYYQEAKSS RIMDSFKNMV PQQALVIRDG EKLQINAEEV 180
  181 VQGDLVEIKG GDRVPADLRI ISSSGCKVDN SSLTGESEPQ TRSPEFTHEN PLETRNISFF 240
  241 STNCVEGTAH GIVIATGDHT VMGRIATLAS GLEVGQTPIN MEIEHFIHII TGVAIFLGMS 300
  301 FFILSIILGY TWLEAVIFLI GIIVANVPEG LLATVTVCLT LTAKRMARKN CLVKNLEAVE 360
  361 TLGSTSTICS DKTGTLTQNR MTVAHMWFDN QIHEADTTED QSGCDFDKSS PTWFSLSRVG 420
  421 GLCNRAVFKA GQEEIPIRTR DTAGDASESA LLKCVEILSG NVETLRGNNR KVAEIPFNST 480
  481 NKYQLSIHEL EDSPTGHLLV MKGAPERILD RCSTIMINGV EFPIDDDWMD AFQGAYMELG 540
  541 GLGERVLGFC HLFLSPSQFP RGFEFDCDDV NFPVNQLCFL GLISMVDPPR AAVPDAVGKC 600
  601 RSAGIKVIMV TGDHPITAKA IAKGVGIISE GNETVEDIAE RLNIPLSQVN PREAKACVVH 660
  661 GSDLKDMSSE YLDDILRNHT EIVFARTSPQ QKLIIVEGCQ RQGAIVAVTG DGVNDSPALK 720
  721 KADIGVAMGI TGSDVSKQAA DMILLDDNFA SIVTGVEEGR LIFDNLKKSI AYTLTSNIPE 780
  781 ITPFLLFIIA SVPLPLGTVT ILCIDLGTDM VPAISLAYES AESDIMKRQP RNPKTDKLVN 840
  841 ERLISMAYGQ IGMIQALGGF FTYFVIMAEN GFLPQTLLGI RLDWDDRTVN DLEDGYGQQW 900
  901 TYEQRKIIEF TCHTSFFVSI VVVQWADLII CKTRRNSVFQ QGMKNRILIF GLFAETALAA 960
  961 FLSYCPGMDV ALRMYPLKIM WWFCAFPYSL LIFVYDEIRK FILRRNPGGW VEIETYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle