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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55249973, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVGDGRDQY ELAATSEQGG KKKNKNKKKE KDMDELKKEV DLDDHKLTLE ELNRKYGTDL  60
   61 NRGLTTARAA EILARDGPNA LTPPPTTPEW VKFCKQMFGG FSMLLWTGAL LCFLAYGIQA 120
  121 AMEDEPANDN LYLGVVLSAV VIITGCFSYY QEAKSSKIMD SFKNLVPQQA LVVRDGEKNH 180
  181 VNAEEVVVGD LVEVKGGDRI PADLRIIASH GCKVDNSSLT GESEPQTRSP DYSNDNPLET 240
  241 RNIAFFSTNC VEGTARGIVI STGDRTVMGR IATLASGLEV GRTPISIEIE HFIHIITGVA 300
  301 VFLGVSFFVL SLALGYSWLE AVIFLIGIIV ANVPEGLLAT VTVCLTLTAK RMAKKNCLVK 360
  361 NLEAVETLGS TSTICSDKTG TLTQNRMTVA HMWFDNQIHE ADTTENQSGT SFDRSSATWA 420
  421 SLARVAGLCN RAVFLAEQTD VPILKRDVAG DASESALLKC IELCCGSVKD MREKYTKVAE 480
  481 IPFNSTNKYQ LSVHKNPNGG TESKHLLVMK GAPERILDRC STILIQGKVQ ALDDEMKEAF 540
  541 QNAYLELGGL GERVLGFCHF CLPDEEFPEG FPFDTEDVNF PTENLCFVGL MSMIDPPRAA 600
  601 VPDAVGKCRS AGIKVIMVTG DHPITAKAIA KGVGIISEGN ETVEDIAARL NIPVNEVNPR 660
  661 DAKACVVHGG DLKDLSCEQL DDILKHHTEI VFARTSPQQK LIIVEGCQRQ GAIVAVTGDG 720
  721 VNDSPALKKA DIGVAMGIAG SDVSKQAADM ILLDDNFASI VTGVEEGRLI FDNLKKSIAY 780
  781 TLTSNIPEIT PFLLFIIANI PLPLGTVTIL CIDLGTDMLP AISLAYEAAE SDIMKRQPRN 840
  841 PKTDKLVNER LISIAYGQIG MIQALAGFFT YFVILSENGF LPSRLLGIRV YWDDKHINDL 900
  901 EDSYGQQWTY EQRKIVEFTC HTAFFASIVV VQWADLIICK TRRNSVFQQG MKNKILIFGL 960
  961 FEETALAAFL SYCPGMDVAL RMYPLKPNWW FCAFPYSLLI FIYDEMRKLI LRRNPGGWVE1020
 1021 RETYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle