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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11096275, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLVTGNDEY KLAATSEDGV KKPKKGKKNK KDMDELKKEV EMDDHKLTLE ELSRKYGTDL  60
   61 NKGLSITRAK EILARDGPNA LTPPVTTPEW VKFCRQLFGG FQTLLWIGAL LCFFAYSIQA 120
  121 ASEEEPANDN LYLGLVLAFV VTVNGCFSYY QEAKSSRIMD SFRNLVPQKA LVVREGEKSV 180
  181 IDAEDVVVGD LVEVKGGDRI PADIRIVSSQ GCKVDNSSLT GESEPQTRAP EMSSDNPLET 240
  241 RNIAFFSTNC VDGAARGVVV NTGDRTVMGR IASLASSLEG GQTPIAREIE HFIHIITGVA 300
  301 VFLGLTFLVL SLILGYNWLE GVIFLIGIIV ANVPEGLPAT VTVCLTLTAK RMAKKNCLVK 360
  361 NLEAVETLGS TTTICSDKTG TLTQNRMTVA HMWFDNHIHI ADTTENQTGA SFDRSSATWS 420
  421 ALARVAGLCN RAVFQSNQSH IPVLKRDTAG DASESALLKC IELSCGSVAE MRENYTKLAE 480
  481 IPFNSTNKYQ VSIHKNPNSS EPKHLLVMKG APERILERCS TIFIQGKEQP MDDEMKDAFQ 540
  541 NAYLELGGLG ERVLGFCHFC LPDDQFPEGF AFDTEEMNFP TENLCFVGLM SMIDPPRAAV 600
  601 PDAVAKCRSA GIKVIMVTGD HPITAKAIAK GVGIISEGNE TVDDIAARLK IHIDEVNPRD 660
  661 AKACVIHGGE LKNMTDEQLD DVLQHHTEIV FARTSPQQKL IIVEGCQRQG AIVAVTGDGV 720
  721 NDSPALKKAD IGVAMGIAGS DVSKQAADMI LLDDNFASIV TGVEEGRLIF DNLKKSIAYT 780
  781 LTSKIPEMSP FLMFVLVGIP LPLGTVTILC IDLGTDMVPA ISLAYETAES DIMKRQPRNA 840
  841 ATDRLVNERL ISVSYGQIGM IQAVGGFFTY FVILAENGFL PYDLVGIRVG WEDRFLNDLE 900
  901 DSYGQQWTYE SRKIVEYTCH TAFFASIVIV QWTDLLICKT RRLSIFQQGM KNRVLTFGLL 960
  961 EETALAAFLS YCPGMEVAVR MYPLKPLWWF CAFPYSLLIF IYDEVRKYIL RRNPGGWVER1020
 1021 ETYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle