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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18858297, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLGTGNDDY RLTPTSEDEL KKTKKGKRKK DVDELKKEVE LDDHKLTLDE LSRKYGTGMI  60
   61 KGLSSFRAKE ILERDGPNAL TPPPTTPQWV KFCKLLFGGF QTLLWFGAFL CFLAYGIQVA 120
  121 SVEDAAHDNL YLGLVLAFVV IVNGWFSFYQ ESKSSKIMES FRNLVPQQAL VVRDGEKKVI 180
  181 NAEEVVVGDL IEVCGGDRIP ADLRIVYAQG CKVDNSSLTG ESEPQSRSPE FSHENPLETK 240
  241 NIAFFSTNCV EGTARGIAIS TGDRTIMGRI ASLASSLEGG QTPIAREIEH FIHIISAVSI 300
  301 FLGVTFFVLS LILGYAWIEA VVFLIGIIVA NVPEGLPATV TVCLTLTAKR MAKKNCLVKN 360
  361 LEAVETLGST TTICSDKTGT LTQNRMTVAH MWFDSQIHEA DTTENQSGTS FDRSSPTWAA 420
  421 LARVAGLCNR AVFRAEQSHL PVLNRETAGD ASESALLKCI ELCCGSVIEM REKYRKICEI 480
  481 PFNSTNKYQL SVHKNPSSSG TKHLLVMKGA PERILDRCST ILINGKEQPM DDENKDSFQS 540
  541 AYVELGGLGE RVLGFCQYNL PDDQFPEGFA FDPEDVNFPT ENLCFLGLMS MIDPPRAAVP 600
  601 DAVAKCRSAG IKVIMVTGDH PITAKAIAKG VGIISEGNET VEDIAARMNI PVGEVNPREA 660
  661 KACVVHGGEL KNMNDSDLDE ILRYHTEIVF ARTSPQQKLI IVEGCQRQGA IVAVTGDGVN 720
  721 DSPALKKADI GVAMGISGSD VSKQAADMIL LDDNFASIVT GVEEGRLIFD NLKKSIAYTL 780
  781 TSKIPEMSPF LMFVVVGIPL PLGTVTILFI DLGTDLIPAI SYAYENAEND IMKRQPRNAQ 840
  841 KDRLVNERLI SMAYGQIGMI QAVAGFFTYI TVMAENGFRP SYLPGLRVGW EDRSIGDLED 900
  901 SYGQQWTYEG RKIIESTCHT AFFISIVVVQ WADLLIVKTR RNSILQQGMK NKVLIFAFFE 960
  961 EGALAAFLSY CPGMDIAVRM YPLRPLWWFT ALPYALIIFF YDEIRKYILR RNPGGFVEKE1020
 1021 TYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle