YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18859029, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILSALLEKV CGNYGYLQSQ CRVLSSTKKV ELIFSFIFNK IEYIRYNSTD QKIVGYTEFG  60
   61 EKFVENYKNN TFVLVLAEFG IYNCKKIAKA LISDGMLNHV TVKPEVIIRS VTEAKGNQKA 120
  121 VLVCSEYDFY PKAIKLTWMR NDKRVTADVT SIEEMADGDW YYQIHSHLEY FPQPGEKISC 180
  181 VVDHASFHKP MIYYWDPSLP ETERSKIILG AVGLLMGIFT AAAGVIYYKR NQTG

Type	Start	End	Confidence
Non-Cytoplasmic	1	206	0.65
Transmembrane Helix	207	228	0.94
Cytoplasmic	229	234	0.60