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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3201662, gi|1...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIYWSFFMV FCMTSSVFCT TTKYFTFEED APGTEIGNLS QDLKIDPSED PETSFKFIQT  60
   61 SNSIIDMRQM DGLLTVGEVI DREKLCQRSP QCLITFDVVA FSKEKFQLIH VEIEVKDIND 120
  121 HSPQFTRNET HLDISEDAPL NSRFPLDVAV DHDVGDNYIQ SYHISHNSHF VVEVSTREDG 180
  181 EKSAELVLIK SLDRETEDFY TIEVTATDGG APQKSGSTTL YIRVLDFNDN SPTFEHSSLK 240
  241 VELSEDSPIG SRVLKVHAFD PDAGINGEIV YGFVEGSPSE VTRVFQIDLI SGEVTLKDIV 300
  301 DYETKKSYEL HIQASDLGAN SVSSTCRAIV DIIDVNDNAP EIIIKPMTST SDGVAFITEA 360
  361 AAEESFVALI STSDKDSGPN GYVRTSLEGH EHFKLQQAYS DTFMIITTTT LDRESISEYN 420
  421 LTVISEDLGT PPFKTVKHYT IRITDENDNP PLFSKSIYDV SVIENNIPGS YMTTVVARDL 480
  481 DAGKNGKVSY SLVESKAPDG SSISTFVSVD PHSGSLYTLR SFDFETLKDV QFSVKATDKG 540
  541 FPSLSSTTLI QVRVVDDNDN FPYFTYPVLR NNSAEIPIPM NANTGYLALK VAAKDEDSGI 600
  601 NSELNYHILE DEAKLFSIDK NTGEIILKRK LTASCGEILQ IYVSVVDGAR EPLSSSANIR 660
  661 FIVTDTGAQE DQIVVLLRAE DDETFEFDLW SILVISFAGG CVLLLTAIII LTVSCTIKRR 720
  721 RRSFGRDALY GWSPLSKNNP AGPSIYSGPN GFLRSEGDSM QPCLYEDKSL SFEEKLFLPC 780
  781 KPFEQTFLWQ DEKYCLQRSG TTDQLSVKDS GKGDSDFNDS DSDSSGGAQK PGLTTFQPLA 840
  841 RGSFCSSSDW KIKPCVIQTR NLHAPPGSSY TLGFSRTPLY SHSHCSSHMW RDGAGGTLNT 900
  901 QRPLQTFRSG TLPSYTAHQM RRAVMEIQEQ NEDLQDTLMI NAAAEVATTF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle