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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24371296, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWVKYWGTV AVLCGLLSCA VNGCPHKCSC SGSHVDCQGQ AFKTVPRGIP RNAERLDLDR  60
   61 NNITRITKVD FSGLKNLRVL HLENNQISVI ERGAFEGLKQ LERIRLNRNR LQVLPELLFQ 120
  121 STTKLSRLDL SENQIQAVPR KAFRGITTVK NLQLDSNHIS CIEDGAFRAL RDLEILTLNN 180
  181 NNITLIPLSS FNHMPKLRTL RLHSNNLHCD CHLSWLSDWL RQRRGLAPFT QCMAPAHMRG 240
  241 LNVPDVQKRE FVCTGPVETE PRSCAPQATI CPAACTCNNN IVDCRRKGLT EIPANLPEGI 300
  301 VEIRLEQNMI KNIPAGAFST YKKLKRIDLS KNQISEIAED AFSGLRSLTS LVLYGNKIAE 360
  361 IPKGLFDGLV SLQLLLLNAN KINCLRVNTF KDLQNLNLLS LYDNKLQTIS KGLFAPLRAI 420
  421 KTLHLAQNPF MCDCHLKWLA DYLFDNPIET SGARCSHPRR LANKRISQVK GKKFRCTGAE 480
  481 DYRSRLSGEC FQDLVCPERC RCEGTVVDCS NLKLTKIPPH LPEHTTDLRL NDNEISILEA 540
  541 TGAFKKLPNL RKINLSNNKL RDIREGAFDG AGGVLELLLT GNKLQSVSGR MFKGLIGLKT 600
  601 LMLRSNQISC VDNATFTGLS SVRLLSLHDN RISTIAPGAF NTLHSLSTIN LLSNPYVCDC 660
  661 HLAWLGLWLK KTRVVSGNPR CQKPAFLKEI PIQDVAMPEF SCDGAEENVC LPSAPRCPES 720
  721 CTCSETVVRC SNRGLRSLPK AIPKDTTELY LEGNLLTSVP KELPNLKQLT LLDLSNNSIS 780
  781 HLAPLTFSNM TQLATLILSY NQIRCVPVHA FDGLRSLRLL TLHGNDLSTV PEGAFNHLTS 840
  841 LSHLALGANP LYCDCELRWL SQWVKAGFKE PGIARCTGPP DMADRLLLTT PLNRFQCKGP 900
  901 ADLNLMSKCA PCLATPCQNN GTCVSDVTGS YHCTCPFGYK GRNCEIPINA CISLPCTNGG 960
  961 TCHLTPGLDG QYSCVCPPGY EGQQCELNPD DCEDNDCENN STCVDGINNY TCVCPPNYKG1020
 1021 DLCEEVVDPC LPGFDLCQHD SKCVPLSKGY RCECLPGYVG QQCEQDYNDC LENKCQHGAE1080
 1081 CVDAINGYTC VCKEGFSGLF CENHPPMVLL QNTSPCDQSD CQNGSECLVM EGEPVCRCLP1140
 1141 GYFGTKCQKM VTLHFLGKEA YVELSGTRIR PPMHISFQVA TDKDNGILLY KEDHDPLALE1200
 1201 LYQGHIRLIY DISKYPPTTV YSVESVNDGL FHTVEVLIQN QTLSLVVDKG TPKSLGKLPR1260
 1261 PPAVDHNTQL YIGGVPSLIG TSGLRPGPFQ SFNGCLHDVR LNGELQDLGA GLAGIEGVLF1320
 1321 GCHSCSVCDQ GACRQRGDEG VTCDCPTGHS GPLCEQMSSQ DPCESSRCVH GECVAKGSSY1380
 1381 SCLCVDGYSG QFCDRQDESS ACKGLHCVYG ECRLTESGEP ACHCQPGYSG PTCETALTCE1440
 1441 GEAVRDYLYR QMAHKICTST SRVQRLECRH SCSSGLCCAP TKSRRRKLSF KCPDGSSFSE1500
 1501 EMEITVECGC TKCSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle