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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24371292, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVLKSVVLC ALLCGAGAQS CPSQCSCSGT AVDCHGQSLR SVPRNIPRNV ERLDLNANNL  60
   61 TKITKADFAG LKNLRVLQLM ENKISSIERG AFQDLQELER LRLNRNNLQV LPELLFLGTT 120
  121 KLFRLDLSEN QIQGIPRKAF RGSTEIKNLQ LDYNQISCIE DGAFRALGDL EVLTLNNNNI 180
  181 SRLSVASFNH MPKLRTFRLH SNNLLCDCNV AWLSDWLRQR PRLGLYTQCM APPSLRGHNI 240
  241 AEVQKKEFMC TGPQSHSSCS VLQCPELCTC SNNVVDCRGK GLTEIPTNLP ETITEIRLEQ 300
  301 NSIKIIPAGA FAPYKRLRRI DLSNNQITEL ASDSFQGLRS LNSLVLYGNK ITELPKGLFD 360
  361 GLFSLQLLLL NANKINCLRV DSFQDLQNLN LLSLYDNKLQ TIAKGTFSSL RAIQTLHLAQ 420
  421 NPFMCDCHLK WLADYLQDNP IETSGARCTS PRRLANKRIG QIKSKKFRCS GVEDYRSKLG 480
  481 GDCFADLACP EKCRCEGTTV DCSGQKLTKI PDHIPQYTAE LRLNNNEFTV LEATGIFKKL 540
  541 PQLRKINLSN NKITDIEEGT FEGASGVNEL ILTSNRLEGV HYSMLKGLGG LRTLMLRSNR 600
  601 ISCVNNGSFT GLSSVRLLSL YDNLITSMSP GAFDTLHSLS TLNLLANPFN CNCHLAWLGE 660
  661 WLRKKRIVTG NPRCQSPYFL KEIPIQDVAV QDFACEEGND ENSCSPLARC PAECSCLDTV 720
  721 VRCSNKGLKV LPKGIPRDVT ELYLDGNEFT QVPLELSNYK HLTLIDLSNN QISTLSNHSF 780
  781 SNMSELLTLI LSYNRLRCIP AKAFDGLKSL RLLSLHGNDI AVIPDGAFKD LSSLSHLALG 840
  841 ANPLYCDCHM QWLSDWVKSG YKEPGIARCT GPGDMTDKLL LTTPSKKFTC TGPVDVSILA 900
  901 KCNPCLSNPC KNDGTCSNHP VDFYRCTCPY GFKGQDCEEP IHACISNPCQ NGGTCHLKDG 960
  961 EENTHWCVCP EGFEGDECEI NIDDCEDNDC ENNSTCVDGI NNYTCLCSPE YTGELCEDKL1020
 1021 DFCASELNLC QHDSKCILTA KGFMCECTPG YTGEHCEVDF DDCEDNKCKN GAQCIDAVNG1080
 1081 YTCVCPEGYS GLFCEFSPPM VLPRTSPCDH YDCANGAQCV VKDTDPVCQC LPGYEGVHCE1140
 1141 RLVSVNFINR ESFLQIPSNL ITEQANISLQ IATDEDNGVL LYKGDNEHIA VELYRGRLRV1200
 1201 SYDSGSYPPS AIYSVETIND GSFHVVELVA KDQSLSLSID GGSPKSINTA NSPSPVPSPA1260
 1261 PLYLGGLPQQ SGLASLRQGS GRNGSSFHGC IRNLYINDQL QDLTQFLLQE GVVPGCQPCQ1320
 1321 RSMCAHGQCH ATGQSSFSCE CEAGWTGPLC DQQVNNPCDG NKCIHGSCMA INSYSYSCRC1380
 1381 LPGFAGVLCD EEEQLSPCQY IACKYGRCRV SGLGKAYCEC NSGYTGQSCD REMACRGERV1440
 1441 RDHYQTQQGY AACQSTEKVS RLECRGSCGD GTSCCAPLRS KRRKYTFQCT DGSSFVQEVE1500
 1501 KVVKCGCTKC PS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle