YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115313750, gi...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSEGNETPL ISDQSSVNMG PQPRNKNQAL KVAGVTLLAG ILIAGQAFTA YMAYSHKEQL  60
   61 NTLERRGDRL HEISRKSAMR APLKMHLPMS SLALKYEDDT KENKDSPPSS PKPEPKVLTQ 120
  121 CQKEAAGEVK SLLPSFKPRC NENGDYLSQQ CWEQTDFCWC VDKNGVEIPD TLKEGPAQCW 180
  181 ALNSADIVNE PLLRKNGE

Type	Start	End	Confidence
Cytoplasmic	1	31	0.84
Transmembrane Helix	32	54	0.85
Non-Cytoplasmic	55	198	0.94