YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DBX1B_DANRE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLPSVIAPP AMYPSFLRPS SALSLPPALQ SAFTTHSSFL VEDLLRISRP AAFMHRSIPS  60
   61 PSASPPATGV TTLNTTSSAV HVAMSTALAK RSSSPQTSIS SDPNYLKFGV NAILASTTRN 120
  121 ASPPPPVQGM NAKTFPFPCF DGSFHPFIRA SYFPASSSAV PIPGTFAWPL TARGKPRRGM 180
  181 LRRAVFSDVQ RKALEKMFQK QKYISKPDRK KLATKLGLKD SQVKIWFQNR RMKWRNSKER 240
  241 ELLSSGGCRE QTLPTKMNPN PDLSDVGKRF EHEAVLRESP RAPFCQSRGD HEFNADLHFK 300
  301 SPSISSKHSD FSESEDEEIT VS

Type	Start	End	Confidence
Signal Peptide	1	31	0.66
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	322	0.86