YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15553357, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSMCREILG MCLAIIGFLG AIIICALPMW KVTAFIGANI VTAQTIWEGL WMNCVMQSTG  60
   61 QMQCKIYDSL LALPQDLQAA RALVVIAIIV SFFALILGIA GGKCTNFVER EDAKAKVSIA 120
  121 SGVIFIIAGV LVLVPVCWSA NTIIRDFYNP LLTDAQRREM GASLYIGWGV AALLIIGGGI 180
  181 LCSSCPPKDE KYNMKYSQPR STATSRAYV

Type	Start	End	Confidence
Cytoplasmic	1	7	0.96
Transmembrane Helix	8	30	0.91
Non-Cytoplasmic	31	78	0.92
Transmembrane Helix	79	101	0.91
Cytoplasmic	102	118	0.84
Transmembrane Helix	119	142	0.88
Non-Cytoplasmic	143	163	0.89
Transmembrane Helix	164	185	0.92
Cytoplasmic	186	209	0.95