YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TWS1A_DANRE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPALFLCPV LISVLFLLSS LSLISGCNKA LCASDVSKCL LQGLCQCRPQ EGNCSCCKEC  60
   61 MLCLSSLWEE CCDCVGMCNP RSYNDSPATS KSTVEELYRP IPSLFRALTE GDAPINMMVV 120
  121 SFPVAEELSH HENLVSFLET LDSQSQNISL PTSSAQDDAL CTVVYFDDCV SIRQCKQYCE 180
  181 SMGGSKYRWF HNACCECIGP ECLDYGSKTV KCMNCLI

Type	Start	End	Confidence
Signal Peptide	1	26	0.98
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	217	0.98