YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	C1RL_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCWLLLWGIL HTCPTQASVL LAQQFPQQLT SPGYPEPYIK GQESHADIEA PEGFAVRLIF  60
   61 QDFDLEPSPG CEGDSVTIST RGTDATRLCG QQGSSLGSPP NQMEFVSSGR SLRLTFRAHS 120
  121 SKNKVTHLHK GFLALYQAAV SQPNGDAEAF TTPGANPPEI QNHCPGPYYK EEQTGTLSCP 180
  181 SSRKWKDRQR GEEVPECVPV CGRPVVPIAE NPNTFGSSRA KPGNFPWQAF TSIYGRGGGA 240
  241 LLGDRWILTA AHTIFPKDSI YLRKNKTVNV FLGHTDVDEL LKLGNHPVRR VVVHPDYRQE 300
  301 ESHNFDGDIA LLELEHRVPL GPSLLPVCLP DNETLYHSGL WGYISGFGVE MGWLTTKLKY 360
  361 SKLPVAPREA CEAWLRQRQR TEVFSDNMFC VGEEMQVNSV CQGDSGSVYV VWDDRALRWV 420
  421 ATGIVSWGVG CGKGYGFYTK VLSYVDWIKG VIECKDRCPE A

Type	Start	End	Confidence
Signal Peptide	1	17	0.98
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	461	0.98