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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50657408, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVALQELGS GGSMVEYKRA KLQDEELPEV TVEGRAIQDS LEVGSQKRTR QLFGSHTQLE  60
   61 LVLAGLILVL AALLLGCLVA LWVHTDPVHS TCITEACIRV AGKILESLDR GVSPCQDFYQ 120
  121 FSCGGWIRRN PLPSGRSRWN TFNSLWDQNQ AILKHLLENS TFNSSSEAER KTRSFYLSCL 180
  181 HLERIEKLGA KPLQDLIDKI GGWNITGPWD EDNFMEVLKA VAGTYRAAPF FTVYVGADSK 240
  241 SSNSNIIQVD QSGLFLPSRD YYLNRTANEK VLAAYLDYMV ELGMLLGGQP TSTRAQMQQV 300
  301 LELEIQLATI TVPQDQRRDE EKIYHKMSIS ELQTLAPSMD WLEFLSFLLS PLELGDSEPV 360
  361 VVYGTEYLQQ VSELINRTEP SILNNYLIWN LVQKTTSSLD QRFETAQEKL LETLYGTKKS 420
  421 CTPRWQTCIS NTDDALGFAL GSLFVKATFD RQSKEIAEGM ISEIRAAFEE TLENLVWMDE 480
  481 KTRLAAKEKA DAIYDMIGFP DFILEPRELD DVYDGYEVSE DSFFQNMLNL YNFSAKVMAD 540
  541 QLRKPPSRDQ WSMTPQTVNA YYLPTKNEIV FPAGILQAPF YAHNHPKALN FGGIGVVMGH 600
  601 ELTHAFDDQG REYDQEGNLR PWWQNESLTA FQNHTACMEE QYNQYQVNGE RLNGLQTLGE 660
  661 NIADNGGLKA AYNAYKAWLR KHGEEQPLPA VGLTNHQLFF VGFAQVWCSV RTPESSHEGL 720
  721 VTDPHSPARF RVLGTLSNSR DFLRHFGCPV GSPMNPGQLC EVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle