YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PLPR4_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRAGSSGAR GECDISGTGR LRLEQAARLG GRAVHTSPTG GLGARQVAGM SAKERPKGKV  60
   61 IKDSVTLLPC FYFVELPILA SSVVSLYFLE LTDVFKPVHS GFSCYDRSLS MPYIEPTQEA 120
  121 IPFLMLLSLA FAGPAITIMV GEGILYCCLS KRRNGAGLEP NINAGGCNFN SFLRRAVRFV 180
  181 GVHVVGLCST ALITDIIQLA TGYQAPYFLT VCKPMYTSLE GSCKENSYIV EEICSGSDLT 240
  241 VINNGKKSFP SQHATLAAFA AVYVSMYFNS TLTDSSKLLK PLLVFTFIIC GIICGLTRIT 300
  301 QYKNHPVDVY CGFLIGGGIA LYLGLYAVGN FLPSEDSMLQ HRDALRSLTD LNQDPSRVLS 360
  361 AKNGSSGDGI AHTEGILNRN HRDASSLTNL KRANADVEII TPRSPMGKES MVTFSNTLPR 420
  421 ANTPSVEDPV RRNASIHASM DSARSKQLLT QWKSKNESRK MSLQVMDSEP EGQSPPRSIE 480
  481 MRSSSEPSRV GVNGDHHVPG NQYLKIQPGT VPGCNNSMPA GPRVSIQSRP GSSQLVHIPE 540
  541 ETQENISTSP KSSSARAKWL KAAEKTVACN RGNNQPRIMQ VIAMSKQQGV LQSSPKNAEG 600
  601 STVTCTGSIR YKTLTDHEPS GIVRVEAHPE NNRPIIQIPS STEGEGSGSW KWKAPEKSSL 660
  661 RQTYELNDLN RDSESCESLK DSFGSGDRKR KHIDSNEHHH HGITTIRVTP VEGSEIGSET 720
  721 LSVSSSRDST LRRKGNIILI PERSNSPENT RNIFYKGTSP TRPYKD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle