YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	G6PC3_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESTLSAGIM MAEALQNQLP GLENMWLWVT FLADPKNLFQ FYFPAVYYAS RRLGISLFWI  60
   61 AFITEWLNLV FKWFLFGDRP FWWVHESGYS AQTPVQIHQF PSSCETGPGS PSGHCMITGA 120
  121 ALWPVMIAIS SQVASQTRSP WVRVIPGLAY CTFLLAVGLS RVFLLAHFPH QVLAGLLAGV 180
  181 ILGWLLSPRV PMERELSFYG LTALTLMLGA SLMYWTLFTL GLDLSWSINL ASKWCDRPEW 240
  241 VLVDSRPFAS LSRDSGSALG LGIALHTPCY AQIRRVHLGN GQKIACFVLA MGLLVFLEWL 300
  301 GHPPQISLFY IFNFLKFTLW PCLVVALVPW MVHTLSAQEA PPIRSS

Type	Start	End	Confidence
Cytoplasmic	1	54	0.88
Transmembrane Helix	55	76	0.91
Non-Cytoplasmic	77	109	0.97
Transmembrane Helix	110	133	0.81
Cytoplasmic	134	140	0.85
Transmembrane Helix	141	163	0.86
Non-Cytoplasmic	164	167	0.70
Transmembrane Helix	168	187	0.91
Cytoplasmic	188	197	0.81
Transmembrane Helix	198	218	0.96
Non-Cytoplasmic	219	249	0.96
Transmembrane Helix	250	270	0.80
Cytoplasmic	271	283	0.66
Transmembrane Helix	284	302	0.93
Non-Cytoplasmic	303	316	0.69
Transmembrane Helix	317	335	0.91
Cytoplasmic	336	346	0.87