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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50657364, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRQWLLLLL LPLSFPVILT RELLCGGSPE PCANGGTCLR LSQGQGTCQC APGFLGETCQ  60
   61 FPDPCWDTQL CENGGSCQAL LPTAPSSHSP TSPLTPHFSC TCPSGFTGDR CQSPLEELCP 120
  121 PSFCSNGGHC SVQVSGRPQC SCEPGWTGEQ CQLRDFCSAN PCANGGVCLA TYPQIQCRCP 180
  181 TGFEGHICER DVNECFLEPG PCPRGTSCHN TLGSFQCLCP VGQEGPQCKL RKGACLPGTC 240
  241 LNGGTCQLVP EGDTTFHLCL CPPGFTGLNC EMNPDDCVRN QCQNGATCQD GLGTYTCLCP 300
  301 KTWKGWDCSE DIDECEAQGP PRCRNGGTCQ NSAGGFHCVC VSGWGGEGCD ENLDDCAAAT 360
  361 CALGSTCIDR VGSFSCLCPP GRTGLLCHLE DMCLRQPCHV NAQCSTNPLT GSTLCICQPG 420
  421 YSGPTCHQDL DECQMAQQGP SPCEHGGSCI NTPGSFNCLC LPGYTGSRCE ADHNECLSQP 480
  481 CHPGSTCLDL LATFQCLCPP GLEGRLCEVE INECASNPCL NQAACHDQLN GFLCLCLPGF 540
  541 TGARCEKDMD ECSSAPCANG GHCQDQPGAF HCECLPGFEG PRCETEADEC RSDPCPVGAS 600
  601 CLDLPGAFLC LCRPGFTGQL CEVPLCSPIL CQPGQQCQDQ EHRAPCLCPD GSPGCVPAED 660
  661 DCPCHHGHCQ RSLCVCNEGW TGPECETELG GCLSTPCAHG GTCHPQPSGY NCSCLAGYTG 720
  721 LTCSEEITAC HSGPCLNGGS CSIHPEGYSC TCPPSHTGPH CQTAVDHCAS ASCLNGGTCM 780
  781 SKPGTFFCHC ATGFQGLHCE KKIHPSCADN PCRNKATCQD TPRGARCLCS PGYTGSSCQT 840
  841 LIDLCARKPC PHTARCLQSG PSFHCLCHQG WTGSLCDLPL SCQAAAMSQG VEISNLCQNG 900
  901 GLCIDTGSSY FCRCPPGFEG KLCQDTVNPC TSKPCLHGAT CVPQPNGYVC QCAPGYEGQN 960
  961 CSKVHDACQS GPCHNHGTCT PRPGGFHCAC PPGFVGLRCE GDVDECLDRP CHPSGTASCH1020
 1021 SLANAFYCQC LPGHTGQRCE VEMDLCQSQP CSNGGSCEVT TGPPPGFTCR CPEGFEGPTC1080
 1081 SRKAPACGNH HCHNGGLCLP SPKPGSPPLC ACLSGFGGPD CLTPPAPPGC GPPSPCMHNG1140
 1141 SCTETPGLGN PGFQCTCPPD SPGPRCQRPG ANGCEGRGGD GACDAGCSGP GGDWDGGDCS1200
 1201 LGVPDPWKGC PPHSQCWLLF RDGRCHPQCD SEECLFDGYD CEIPPTCTPA YDQYCRDHFH1260
 1261 NGHCEKGCNN AQCGWDGGDC RPEGDDSEGG PSLALLVVLS PPALDQQLLA LARVLSLTLR1320
 1321 VGLWVRKDSE GRNMVFPYPG TRAKEELSGT RDSSSWERQA PHTQTPGKET ESLGAGFVVV1380
 1381 MGVDLSRCGP EHPASRCPRD SGLLLRFLAA MAAVGALEPL LPGPLLAAHP QAGTGSPATR1440
 1441 LPWPILCSPV VGVLLLALGA LLVLQLIRRR RREHGALWLP PGFIRRPQTQ QAPHRRRPPL1500
 1501 GEDNIGLKAL KPEAEVDEDG VVMCSGPEEG EAEKTASASR CQLWPLRSGC EGLPQAVMLT1560
 1561 PPQECESELP DSDTCGPDGV TPLMSAVFCG GVQSTTVQRL GLGNPEPWEP LLDRGACPQA1620
 1621 HTVGTGETPL HLAARFSRPT AARRLLEAGA NPNQPDRAGR TPLHTAVAAD AREVCQLLLA1680
 1681 SRQTAVDART DDGTTPLMLA ARLAVEDLVE ELIAARADVG ARDKRGKTAL HWAAAVNNAR1740
 1741 AARCLLQTGA DKDAQDSREQ TPLFLAAREG AVEVAQLLLE IGAARGLRDQ AGLAPADVAR1800
 1801 QRSHWDLLTL LEGAGPITQE ARSHARNTPG GGAAPRCRTL SAGARPRGGG ACLQARTWSV1860
 1861 DLGARRGAVY ARCRSRSGGS GGPSMRGRRL SADSRGRRGA RVSQDDWPRD WVALEACGSA1920
 1921 CSAPIPPPSL TPSPERGSPQ VSWGLPVHQE VPLNSGGRNQ N

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