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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47059099, gi|...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIYCKPSVL FQDSYLLVLT QLLCWVTTKG FRVFGPSDPV VAAPGREAIL PCSVSPAMSV  60
   61 ENMEELRWFR TRFSQAVFVY RDQEEQKEEQ MIEYSWRTSL VKDKFHEGKA AVRIQNVQES 120
  121 DSGIYVCHFK QGHFHEEAIL ELKVAAMGSV PEVYIKGPED GGVCVVCMTS GWYPEPQVHW 180
  181 RDSRGEILPA SSETLHEDAE GLITTETSLV LRDSSVRNVT CSTFNPVLGQ EKAMAMVIPE 240
  241 PFFPQASPWK TAFLVILTMM GLLVLGTISL FGWERFVRLK LQKEQIHIHC EKDELQTEKE 300
  301 DALRTAKWGY CEWVLTRVCS FTAWRKAQLY ADWRKEHFQT WTFTLDPASA HPTLVISQDR 360
  361 MRVTRKDTTV CLDDLFSVLG TKGISSGRYY WEVKLENREG SKWILGVCRE GVERKGFYFE 420
  421 SPEKGFWTVG QSSSGYWAYV DSGRDSLSIR QAPESVGVFV DYDKRNISFY NMSDMSHLFS 480
  481 FHEASFSGTL LPYFQLKCGN VSMTVNSMAC VSEGQEGEEG RKGRKRSRKG RKRRKGRRPK 540
  541 KGKGLALLPL KESLSPTGEG LVPGSCVVVS PSGEESPFLQ DARDTLFP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle