YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47057303, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRYADPSANR DLLGNRTLLF IFICAFALVT LLQQILYSKS YIKRYFEFYK EPLEFNSTRC  60
   61 LELRQEILEV KVLSMVKQSE LFERWKSLQI CKWAMDASEA SLFKSTLSRC CNAPNFLFTT 120
  121 QKNTPVETNL RYEVESSGLY HIDQEIFKMF PKEMPYYRSQ FKKCAVVGNG GILKNSGCGK 180
  181 EINSADFVFR CNLPPISGIY TTDVGEKTDV VTVNPSIIID RFHKLEKWRR PFFSVLQRYE 240
  241 NASVLLPAFY NVRNTLVSFR VKYMLDDFQS GEPVYFFHPH YLSSVSRYWL SLGVRARRIS 300
  301 TGLILVTAAL ELCEEVHLFG FWAFPMNPSG FFITHHYYDN VKPKPGFHAM PSEIFTFLRM 360
  361 HSRGILRVHT GTCNCC

Type	Start	End	Confidence
Cytoplasmic	1	11	0.82
Transmembrane Helix	12	37	0.76
Non-Cytoplasmic	38	376	0.87