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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46810303, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRGSRIRTS RVTLLAGRAP QMRAAPRRAP AAQPPAAAAP SAVGSPAAAP RQPGLMAQMA  60
   61 TTAAGVAVGS AVGHTLGHAI TGGFSGGGSA EPAKPDITYQ EPQGAQLQNQ QSFGPCSLEI 120
  121 KQFLECAQNQ SDVKLCEGFN EVLRQCRIAN VDHPRPVDHG ERNVKRRKYN EGFLQYGFTS 180
  181 TITVGIERPQ CVICGVVLSA ESMKPNKLKR HFESKHSSFA GKDTNYFRSK ADGLKKARPD 240
  241 TGSKSNKQNV AAVETSYLVA LRIARDMKPH TFAAHLLFPV AKDRVRVMIG DEFVTKLSAV 300
  301 SLSNDTVRRR IHDMSADILD QVVQEIKSAP LPICSIQLDE STDVANCLQL MVYVRYINDG 360
  361 DFKDEFLCCK PLERTATALD VFEAVDSFLR QHEISWKSIC GVCTDGAPAT LGCQSGFQRL 420
  421 VLNESPKAIG AHCMLHLQTL AMKTLPQDFQ EVMKSVLSSV NFVKASSLNS RLFLQLCSDL 480
  481 DEPSKTLLLH TEGRWLSRGK VLKRIFELRD ELKMFFNQKA IRQFEALFSD NSALQKVAYL 540
  541 VDIFTILNEL NLSLQGPNST CLDLSEKIHS FQMKLQLWQK KIG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle