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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RXFP1_MOUSE
Protein type: Transmembrane
Type Confidence: 0.59
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSGPFFFCI FIIGKYFTLG SAQDVSCPLG SFPCGNMSRC LPQLLHCNGV DDCGNRADED  60
   61 HCGDNNGWSL QLDKYFANYY KLASTNSFEA ETSECLVGSV PMHCLCRDLE LDCDEANLRA 120
  121 VPSVSSNVTV MSLQRNFIRT LPPNGFRKYH ELQKLCLQNN RIHSVSVSAF RGLRSLTKLY 180
  181 LSHNRITFLK PGVFEDLHRL EWLIIEDNHL SRISPLTFYG LNSLILLVLM NNALTRLPDK 240
  241 PLCQHMPRLH WLDFEGNRIH NLRNLTFISC NNLTVLVMRK NKINYLNEHA FTHLQKLDEL 300
  301 DLGSNKIENL PPNIFKDLKE LSQLNISYNP IQKIEVNQFD CLAKLKSLSL EGIEISNIQQ 360
  361 RMFRPLINLS HIYFKKFQYC GYAPHVRSCK PNTDGISSLE NLLASIIQRV FVWVVSAITC 420
  421 FGNIFVICMR PYIRSENKLH AMSIISLCCA DCLMGVYLFV IGAFDLKFRG EYNKHAQPWM 480
  481 ESVHCQFMGS LAILSTEVSV LLLTFLTLEK YICIVYPFRC LRPRKCRTIT VLIFIWIIGF 540
  541 IVAFAPLGNK EFFKNYYGTN GVCFPLHSED TGSTGAQIYS VVIFLGINLV AFIIIVFSYG 600
  601 SMFYSVHQSS VTVTEIQKQV KKEVVLAKRF FFIVFTDALC WIPIFILKFL SLLQVEIPDS 660
  661 ITSWVVIFIL PINSALNPII YTLTTRPFKE MIHQLWHNYR QRRSVDRKET QKAYAPSFIW 720
  721 VEMWPLQEMS SGFMKPGAFT DPCDLSLVSQ SSRLNSYS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle