YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CXG3_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLELPIKC RMCGRFLRQL LAQESQHSTP VGRFLLPMLM GFRLLILVSS GPGVFGNDEN  60
   61 EFICHLGQPG CKTICYDVFR PLSPLRFWAF QVILMAVPSA IYVAFTLYHV IGYWEVPGKE 120
  121 NKEQETQISK GDHSKDVSGA KSLKLLWAYV AHLGVRLALE GAALGVQYNL YGFKMSSTFI 180
  181 CREDPCIGST TCFQSHPSEK TIFLNIMFGI SGACFLFIFL ELALLGLGRF WRIYKHKLSF 240
  241 LKKLPTSESS VRSKDTTDEL SVVEAKEPF

Type	Start	End	Confidence
Cytoplasmic	1	33	0.89
Transmembrane Helix	34	53	0.73
Non-Cytoplasmic	54	86	0.81
Transmembrane Helix	87	111	0.87
Cytoplasmic	112	144	0.82
Transmembrane Helix	145	166	0.72
Non-Cytoplasmic	167	205	0.85
Transmembrane Helix	206	228	0.89
Cytoplasmic	229	269	0.88